In reply to Jon Wickham:
> If you use a wash-in proofer it will waterproof this liner, preventing it from moving moisture away from your body and your jacket will no longer breath
Your jacket will still breathe perfectly well. Proofing the mesh liner doesn't affect the membrane at all. It will prevent the mesh liner from mopping up condensed vapour on the inner face of the shell, though. One might argue that this condensed vapour might cause internal 'wetting out', but I don't think it will have too much effect.
If the OP's jacket is Event, it may be worth searching for recent threads on advice on cleaning, which differs from the usual advice given for Gore-tex (i.e. don't use detergent).
Above all, it may be worth giving the jacket a good wash with a soap-based cleaner, in a clean washing machine (with no detergent residues clogging the thing up. Followed by a warm (not hot) tumble dry to restore the DWR. You may find that it doesn't need re-proofing once it's been cleaned.